Papers+Conferences

2007
Silberstein M, Damborsky J, Vajda S.  2007.  Exploring the Binding Sites of the Haloalkane Dehalogenase DhlA from Xanthobacter autotrophicus GJ10. Biochemistry. 46(32):9239-9249. Download: PDF (428.17 KB)
2006
Silberstein M, Landon MR, Wang YE, Perl A, Vajda S.  2006.  Computational methods for functional site identification suggest a substrate access channel in transaldolase. Genome Informatics. 17(1):13-22. Download: PDF (2.84 MB)
2003
Silberstein M, Dennis S, Brown L, Kortvelyesi T, Clodfelter KH, Vajda S.  2003.  Identification of Substrate Binding Sites in Enzymes by Computational Solvent Mapping. Journal of Molecular Biology. 332(5):1095-1113. Download: PDF (1.9 MB)
Kortvelyesi T, Dennis S, Silberstein M, Brown L, Vajda S.  2003.  Algorithms for computational solvent mapping of proteins. Proteins: Structure, Function, and Genetics. 51(3):340-351. Download: PDF (220.47 KB)
Kortvelyesi T, Silberstein M, Dennis S, Vajda S.  2003.  Improved mapping of protein binding sites. Journal of Computer-Aided Molecular Design. 17(2/4):173-186. Download: PDF (397.37 KB)