Kozakov D, Hall DR, Xia B, Porter KA, Padhorny D, Yueh C, Beglov D, Vajda S.  2017.  The ClusPro web server for protein–protein docking. Nature Protocols. 12(2):255-278. Download: PDF (4.46 MB)
Yueh C, Hall DR, Xia B, Padhorny D, Kozakov D, Vajda S.  2017.  ClusPro-DC: Dimer Classification by the Cluspro Server for Protein–Protein Docking. Journal of Molecular Biology. 429(3):372-381. Download: PDF (743.59 KB)
Padhorny D, Kazennov A, Zerbe BS, Porter KA, Xia B, Mottarella SE, Kholodov Y, Ritchie DW, Vajda S, Kozakov D.  2016.  Protein–protein docking by fast generalized Fourier transforms on 5D rotational manifolds. Proceedings of the National Academy of Sciences. 113(30):E4286-E4293. Download: PDF (1.43 MB)